Package: GWASinlps 2.4

GWASinlps: Non-Local Prior Based Iterative Variable Selection Tool for Genome-Wide Association Studies
Performs variable selection with data from Genome-wide association studies (GWAS), or other high-dimensional data with continuous, binary or survival outcomes, combining in an iterative framework the computational efficiency of the structured screen-and-select variable selection strategy based on some association learning and the parsimonious uncertainty quantification provided by the use of non-local priors (see Sanyal et al., 2019 <doi:10.1093/bioinformatics/bty472>).
Authors:
GWASinlps_2.4.tar.gz
GWASinlps_2.4.zip(r-4.7-x86_64)GWASinlps_2.4.zip(r-4.7-arm64)GWASinlps_2.4.zip(r-4.6-x86_64)GWASinlps_2.4.zip(r-4.6-arm64)GWASinlps_2.4.zip(r-4.5-x86_64)
GWASinlps_2.4.tgz(r-4.6-x86_64)GWASinlps_2.4.tgz(r-4.6-arm64)GWASinlps_2.4.tgz(r-4.5-x86_64)GWASinlps_2.4.tgz(r-4.5-arm64)
GWASinlps_2.4.tar.gz(r-4.7-arm64)GWASinlps_2.4.tar.gz(r-4.7-x86_64)GWASinlps_2.4.tar.gz(r-4.6-arm64)GWASinlps_2.4.tar.gz(r-4.6-x86_64)
GWASinlps_2.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
GWASinlps/json (API)
| # Install 'GWASinlps' in R: |
| install.packages('GWASinlps', repos = c('https://nilotpalsanyal.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nilotpalsanyal/gwasinlps/issues
Pkgdown/docs site:https://nilotpalsanyal.github.io
gwashigh-dimensionalnon-local-priorvariable-selectionopenblascpp
Last updated from:76bdbd97d7. Checks:8 NOTE, 2 OK, 5 FAIL. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | NOTE | 161 | ||
| linux-devel-x86_64 | NOTE | 145 | ||
| source / vignettes | OK | 264 | ||
| linux-release-arm64 | NOTE | 142 | ||
| linux-release-x86_64 | NOTE | 166 | ||
| macos-release-arm64 | FAIL | 143 | ||
| macos-release-x86_64 | FAIL | 222 | ||
| macos-oldrel-arm64 | FAIL | 149 | ||
| macos-oldrel-x86_64 | FAIL | 267 | ||
| windows-devel-arm64 | NOTE | 433 | ||
| windows-devel-x86_64 | NOTE | 180 | ||
| windows-release-arm64 | NOTE | 392 | ||
| windows-release-x86_64 | NOTE | 150 | ||
| windows-oldrel-x86_64 | FAIL | 62 | ||
| wasm-release | OK | 107 |
Exports:GWASinlpsnlpsGLMnlpsLM
Dependencies:BHbigmemorybigmemory.sriclicodetoolsdplyrfastglmforeachFormulagenericsglassoglmnetglueintervalsiteratorslatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmclustmgcvmombfmvtnormncvregnlmepillarpkgconfigpracmaR6RcppRcppArmadilloRcppEigenrlangshapesparseMatrixStatssurvivaltibbletidyselectutf8uuidvctrswithr